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SRX3576343: Mapped reads for uncultivated Halieaceae bacterium UBA8669 genome recovered from SRX763405
1 ILLUMINA (Illumina MiSeq) run: 161,346 spots, 79.4M bases, 26.4Mb downloads

Design: Reads from SRX763405 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA8669 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
PRJNA417962 • SRP130174 • All experiments • All runs
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Halieaceae bacterium UBA8669 genome recovered from SRX763405
SAMN08019775 • SRS2846224 • All experiments • All runs
Organism: Halieaceae bacterium
Library:
Name: UBA8669_library
Instrument: Illumina MiSeq
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 161,346 spots, 79.4M bases, 26.4Mb
Run# of Spots# of BasesSizePublished
SRR6486554161,34679.4M26.4Mb2018-02-23

ID:
4961845

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